Publications 2017-05-19T10:07:32+00:00

Publications

  1. Gutierrez, T., William B. Whitman, Marcel Huntemann, Alex Copeland, Amy Chen, Nikos Kyrpides, Victor Markowitz, Manoj Pillay, Natalia Ivanova, Natalia Mikhailova, Galina Ovchinnikova, Evan Andersen, Amrita Pati, Dimitrios Stamatis, T.B.K. Reddy, Chew Yee Ngan, Mansi Chovatia, Chris Daum, Nicole Shapiro, Michael N. Cantor, Tanja Woyke. (2016) Genome sequence of Marinobacter strain MCTG268 isolated from the cosmopolitan marine diatom Skeletonema costatum. Genome Announcements, (in press).
  2. Evans, L., Hennige, S., Gutierrez, T., Adeloye, A.J., Willoughby, N. (2016) Effect of organic carbon enrichment on the treatment efficiency of primary settled wastewater by Chlorella vulgaris. New Biotechnology, 33: S56. doi:10.1016/j.nbt.2016.06.919
  3. Gutierrez, T., Berry, D., Teske, A., Aitken, M.D. (2016) Enrichment of Fusobacteria in sea surface oil slicks from the Deepwater Horizon oil spill. Microorganisms, 4(3), 24; doi:10.3390/microorganisms4030024
  4. Gutierrez, T., William B. Whitman, Marcel Huntemann, Alex Copeland, Amy Chen, Nikos Kyrpides, Victor Markowitz, Manormoney Pillay, Natalia Ivanova, Natalia Mikhailova, Galina Ovchinnikova, Evan Andersen, Amrita Pati, Dimitrios Stamatis, T.B.K. Reddy, Chew Yee Ngan, Mansi Chovatia, Chris Daum, Nicole Shapiro, Michael N. Cantor, Tanja Woyke. (2016) Genome sequence of Arenibacter algicola strain TG409, a hydrocarbon-degrading bacterium associated with marine eukaryotic phytoplankton. Genome Announcements, 4(4):e00765-16. doi:10.1128/genomeA.00765-16
  5. Yang, T., Nigro, L.M., Gutierrez, T., D’Ambrosio, L., Joye, S.B., Highsmith, R., Teske, A. (2016) Pulsed blooms and persistent oil-degrading bacterial populations in the water column during and after the Deepwater Horizon blowout. Deep-Sea Research Part II: Topical Studies in Oceanography, 129: 282-291.
  6. McKay, L.J., Gutierrez, T., Teske, A.P. (2016) Development of a group-specific 16S rRNA-targeted probe set for the identification of Marinobacter by fluorescence in situ hydridization. Deep-Sea Research Part II: Topical Studies in Oceanography, 129: 360-367.
  7. Dombrowski, N., Donaho, J.A., Gutierrez, T., Seitz, K.W., Teske, A.P., Baker, B.J. (2016) Reconstructing metabolic pathways of hydrocarbon-degrading bacteria from the Deepwater Horizon oil spill. Nature Microbiology, doi:10.1038/nmicrobiol.2016.57
  8. Keswani, A., Oliver, D.M., Gutierrez, T., Quilliam, R.S. (2016) Microbial hitchhikers of marine debris: human exposure risks at bathing waters and beach environments. Marine Environmental Research, 118: 10-19.
  9. Sałek, K., Gutierrez, T. (2016) Surface-active biopolymers from marine bacteria for potential biotechnological applications. AIMS Microbiology, 2(2): 92-107.
  10. Gutierrez, T., Banat, I.M. (2015) Isolation of glycoprotein bioemulsifiers produced by marine bacteria. . In Hydrocarbon and Lipid Microbiology Protocols, Springer Protocols Handbooks, McGenity, T.J. et al. DOI 10.1007/8623_2015_128, Springer-Verlag Berlin Heidelberg.
  11. Mishamandani, T., Gutierrez, T., Berry, D., Aitken, M. (2015) Response of the bacterial community associated with a cosmopolitan marine diatom to crude oil shows a preference for the biodegradation of aromatic hydrocarbons. Environmental Microbiology, 18: 1817-1833.
  12. Gutierrez, T., Biddle, J.F., Teske, A., Aitken, M.D. (2015) Cultivation-dependent and cultivation-independent characterization of hydrocarbon-degrading bacteria in Guaymas Basin sediments. Frontiers in Microbiology, http://dx.doi.org/10.3389/fmicb.2015.00695
  13. Gutierrez, T., William B. Whitman, Marcel Huntemann, Alex Copeland, Amy Chen, Nikos Kyrpides, Victor Markowitz, Manormoney Pillay, Natalia Ivanova, Natalia Mikhailova, Galina Ovchinnikova, Evan Andersen, Amrita Pati, Dimitrios Stamatis, T.B.K. Reddy, Chew Yee Ngan, Mansi Chovatia, Chris Daum, Nicole Shapiro, Michael N. Cantor, Tanja Woyke. (2015) Genome Sequence of Halomonas strain MCTG39a, a hydrocarbon-degrading and exopolymer-producing bacterium. Genome Announcements, 3(4):e00793-15. doi:10.1128/genomeA.00793-15.
  14. Gutierrez, T., Couperwhite, I. (2015) Benzene-induced expression of proteins in a Rhodococcus species revealed by analysis of highly purified subcellular fractions. Asian Journal of Microbiology, Biotechnology and Environmental Sciences, 17:69-78.
  15. Gutierrez, T., William B. Whitman, Marcel Huntemann, Alex Copeland, Amy Chen, Nikos Kyrpides, Victor Markowitz, Manormoney Pillay, Natalia Ivanova, Natalia Mikhailova, Galina Ovchinnikova, Evan Andersen, Amrita Pati, Dimitrios Stamatis, T.B.K. Reddy, Chew Yee Ngan, Mansi Chovatia, Chris Daum, Nicole Shapiro, Michael N. Cantor, Tanja Woyke. (2015) Genome Sequence of Porticoccus hydrocarbonoclasticus strain MCTG13d, an obligate PAH-degrading bacterium associated with marine eukaryotic phytoplankton. Genome Announcements, 3(3):e00672-15. doi:10.1128/genomeA.00672-15.
  16. Gutierrez, T., Haydn F. Thompson, Angelina Angelova, William B. Whitman, Marcel Huntemann, Alex Copeland, Amy Chen, Nikos Kyrpides, Victor Markowitz, Krishnaveni Palaniappan, Natalia Ivanova, Natalia Mikhailova, Galina Ovchinnikova, Evan Andersen, Amrita Pati, Dimitrios Stamatis, T.B.K. Reddy, Chew Yee Ngan, Mansi Chovatia, Chris Daum, Nicole Shapiro, Michael N. Cantor, Tanja Woyke. (2015) Genome Sequence of Polycyclovorans algicola strain TG408, an obligate PAH-degrading bacterium associated with marine eukaryotic phytoplankton. Genome Announcements, 3(2):e00207-15. doi:10.1128/genomeA.00207-15.
  17. Gutierrez, T. (2014) Cultivating aerobic hydrocarbon-degrading bacteria from micro-algae. In Hydrocarbon and Lipid Microbiology Protocols, Springer Protocols Handbooks, McGenity et al. DOI 10.1007/8623_2014_1, Springer-Verlag Berlin Heidelberg.
  18. Gutierrez, T., Aitken, M.D. (2014) Role of methylotrophs in the degradation of hydrocarbons during the Deepwater Horizon oil spill. The ISME Journal, 8:2543-2545.
  19. Mishamandani, S., Gutierrez, T., Aitken, M.D. (2014) DNA-based stable isotope probing coupled with cultivation methods implicates Methylophaga in hydrocarbon degradation. Frontiers in Microbiology, 5:76 doi: 10.3389/fmicb.2014.00076
  20. Gutierrez, T., Rhodes, G., Mishamandani, S., Berry, D., Whitman, W.B., Nichols, P.D., Semple, K.T., Aitken, M.D. (2014) Polycyclic aromatic hydrocarbon degradation of phytoplankton-associated Arenibacter and description of Arenibacter algicola nov., an aromatic hydrocarbon-degrading bacterium. Applied and Environmental Microbiology, 80:618-628.
  21. Gutierrez, T., Singleton, D.R., Berry, D., Yang, T., Aitken, M.D., Teske, A. (2013) Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP. The ISME Journal, 7:2091-2104.
  22. Gutierrez, T., Berry, D., Yang, T., Mishamandani, S., McKay, L., Teske, A., Aitken, M. (2013) Role of bacterial exopolysaccharides (EPS) in the fate of the oil released during the Deepwater Horizon oil spill. PLoS ONE, doi: 1371/journal.pone.0067717.
  23. Gutierrez, T., Green, D.H., Whitman, W.B., Nichols, P.D., Semple, K.T., Aitken, M.D. (2013) Polycyclovorans algicola nov., sp. nov., an aromatic hydrocarbon-degrading marine bacterium found associated with laboratory cultures of marine phytoplankton. Applied and Environmental Microbiology, 79:205-214.
  24. Gutierrez, T., Biller, D., Shimmield, T., Green, D.H. (2012) Metal binding properties of the EPS produced by Halomonas TG39 and its potential in enhancing trace element bioavailability to eukaryotic phytoplankton. BioMetals, 25:1185-1194.
  25. Gutierrez, T., Green, D.H., Nichols, P.D., Whitman, W.B., Semple, K.T., Aitken, M.D. (2012) Algiphilus aromaticivorans nov., sp. nov., an aromatic hydrocarbon-degrading bacterium isolated from a culture of the marine dinoflagellate Lingulodinium polyedrum, and proposal of Algiphilaceae fam. nov. International Journal of Systematic & Evolutionary Microbiology, 62:2743-2749.
  26. Gutierrez, T., Nichols, P.D., Whitman, W.B., Aitken, M.D. (2012) Porticoccus hydrocarbonoclasticus nov., an aromatic hydrocarbon-degrading bacterium identified in laboratory cultures of marine phytoplankton. Applied and Environmental Microbiology, 78:628-637.
  27. Gutierrez, T., Singleton, D.R., Aitken, M.D., Semple, K.T. (2011) Stable-isotope probing of an algal bloom identifies uncultivated members of the Rhodobacteraceae associated with low molecular-weight PAH degradation. Applied & Environmental Microbiology, 77:7856-7860.
  28. Gutierrez, T. (2011) Identifying polycyclic aromatic hydrocarbon-degrading bacteria in oil-contaminated surface waters at Deepwater Horizon by cultivation, stable isotope probing and pyrosequencing. Reviews in Environmental Science & Bio/Technology, 10:301-305.
  29. Gutierrez, T. (2010) Searching for new bacterial species that break down polyaromatic hydrocarbons in coastal and oceanic waters. Reviews in Environmental Science & Bio/Technology, 9:205-209.
  30. Pete, R., Davidson, K., Hart, M., Gutierrez, T., Miller, A.E.J. (2010) Diatom derived dissolved organic matter as a driver of bacterial productivity: the role of nutrient limitation. Journal of Experimental Marine Biology & Ecology, 391:20-26.
  31. Gutierrez, T., Leo, V.V., Walker, G.M., Green, D.H. (2009) Emulsifying properties of a glycoprotein extract produced by a marine Flexibacter species strain TG382. Enzyme and Microbial Technology, 45(1): 53-57.
  32. Gutierrez, T., Learmonth, R., Couperwhite, I. (2009) Analysis of benzene-induced effects on Rhodococcus 33 reveals that constitutive processes play a major role in conferring tolerance. The Scientific World Journal, 9, 209-223. DOI 10.1100/tsw.2009.29.
  33. Gutierrez, T., Morris, G. and Green, D.H. (2009) Yield and physicochemical properties of EPS from Halomonas Strain TG39 identifies a role for protein and anionic residues (sulfate and phosphate) in emulsification of n-hexadecane. Biotechnology & Bioengineering, 103(1): 207-216.
  34. Gutierrez, T., Shimmield, T., Haidon, C., Black, K. and Green, D.H. (2008) Emulsifying and metal ion binding activity of a glycoprotein exopolymer produced by Pseudoalteromonas species TG12. Applied and Environmental Microbiology, 74(15): 4867-4876.
  35. Gutierrez, T., Mulloy, B., Bavington, C., Black, K., and Green, D. H. (2007) Partial purification and chemical characterization of a glycoprotein (putative hydrocolloid) emulsifier produced by a marine Antarctobacter Applied Microbiology and Biotechnology, 76(5): 1017-1026.
  36. Gutierrez, T., Mulloy, B., Black, K. and Green, D.H. (2007) Glycoprotein emulsifiers from two marine Halomonas species: chemical and physical characterization. Journal of Applied Microbiology, 103(5): 1716-1727.
  37. Green, D. H., Bowman, J. P., Smith, E. A., Gutierrez, T. and Bolch, C. J. S. (2006) Marinobacter algicola nov., isolated from laboratory cultures of paralytic shellfish toxin-producing dinoflagellates. International Journal of Systematic and Evolutionary Microbiology, 56: 523-527.
  38. Gutierrez, T., Ingram, L. O. and Preston, J. F. (2006) Purification and characterization of a furfural reductase (FFR) from Escherichia coli strain LYO1 – An enzyme important in the detoxification of furfural during ethanol production. Journal of Biotechnology, 121: 154-164.
  39. Gutierrez, T., Learmonth, R. P., Nichols, P. D. and Couperwhite, I. (2003) Comparative benzene-induced fatty acid changes in a Rhodococcus species and its benzene-sensitive mutant: possible role of myristic and oleic acids in tolerance. Journal of Chemical Ecology, 29: 2369-2378.
  40. Gutierrez, T., Buszko, M. L., Ingram, L. O. and Preston, J. F. (2002) Reduction of furfural to furfuryl alcohol by ethanologenic strains of bacteria and its effect on ethanol production from xylose. Applied Biochemistry and Biotechnology, 98-100: 327-340.
  41. Gutierrez, J.A., Nichols, P. and Couperwhite, I. (1999) Changes in whole-cell derived fatty acids induced by benzene and occurrence of the unusual 16:16c in Rhodococcus 33. FEMS Microbiology Letters, 176: 213-218.